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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918449.1_cds_XP_016467883.1_60584
CDS Infomation

[gene=LOC107790475] [db_xref=GeneID:107790475] [protein=indole-3-glycerol phosphate synthase, chloroplastic-like] [protein_id=XP_016467883.1] [location=complement(join(74662..74745,74992..75060,75151..75233,75542..75620,76026..76190,76281..76325,77015..77089,79974..80150,80257..80505,80859..81059))] [gbkey=CDS]
Sequence

ATGGATTCTGTAATGCCATTGAGAACCACTACGGCAACGGCGGCAACTGTAGCGGCGACG
GTAAGACCCCGGTTCTCGATTCAACCCCTTGCCAATCCCAGACCCAACAAACCCGCATTC
TCCTTGTCAGTTCCGACATCTATTTCCATGTCCCACCGAGCTCGCAATCTGCCCCAATGT
TCACCCGTTCGAGCTCAACAGGACGGATCATCAGCGGTTTCAGAACCCACCATTCCTGAA
GGAGATGCTCTTAAAATCAAGGAGTGGGAAGCAGAAAGATTCAAAGATGAAATTGCTACA
AGTGAGGGTATAAGAATTAGAAGGAGGCCGCCATCAGGACCTCCTTTGCACTACGTTGGC
CCTTTTGAATTTCGGCTGCAGAATGAAGGCAATACTCCACGTAACATACTTGAAGAAATT
GTCTGGAACAAGGACAAGGAAGTCACACAGATGAAAGAGAAGAAACCTCTTATTGTATTG
AAAAAACTGCTTAGCAGTGCTCCGCCTACCAGAGATTTTCTAGGAGCTCTGAAAGAATCA
TATTCAAGAACTGGATTGCCTGGTCTTATTGCTGAAGTGAAGAAGGCTTCTCCAAGTAGA
GGTGTTCTTCGTGAAGATTTTAATCCAGTTGAGATCGCCAAAGCTTATGAAAGAGGTGGA
GCAGCTTGCCTTATTGTTTTAACAGATCAGAAATATTTTCAGGGAAGCTTTGAAAATCTA
GAGGCCATAAGAAATGCTGGAGTAGAGTGCCCTTTGTTGTGTAAAGAATTCGTTATAGAA
GCTTGGCAACTCTACTATGCTCGGGTTAAAGGTGCCGATGCAGTTCTGTTAATTGCTGCT
GTTCTACCAGATCTTGACATCAAATATATGATTAAGATCTGCAAATTACTTGGATTGACA
GCACTAGTTGAGGTGCATGATGAGAGGGAAATGGATCGTGTCCTCGGAATTGACGGGGTT
GAGCTTATTGGCATCAATAATAGAGACCTTGGAACTTTCAAGGTGGACATTAGCAATACA
AAAAAGCTTCTTGAAGGAGAGCGTGGAGAAAGGATCCGTGAGAAGGGCATAATTGTGGTT
GGGGAGTCTGGACTATTTACTCCAGCTGATATTGCTTATGTACAAGAAGCCGGTGTCAAA
GCGGTTCTAGTTGGAGAGTCACTTGTAAAACAGCCAGATCCTACTAAAGGAATAAGTGAA
CTTTTTGGTAAAGACATCTCCTGCTAA

Peptide Sequence

PEP ID

XP_016467883.1
PEP Infomation

PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MDSVMPLRTTTATAATVAATVRPRFSIQPLANPRPNKPAFSLSVPTSISMSHRARNLPQC
SPVRAQQDGSSAVSEPTIPEGDALKIKEWEAERFKDEIATSEGIRIRRRPPSGPPLHYVG
PFEFRLQNEGNTPRNILEEIVWNKDKEVTQMKEKKPLIVLKKLLSSAPPTRDFLGALKES
YSRTGLPGLIAEVKKASPSRGVLREDFNPVEIAKAYERGGAACLIVLTDQKYFQGSFENL
EAIRNAGVECPLLCKEFVIEAWQLYYARVKGADAVLLIAAVLPDLDIKYMIKICKLLGLT
ALVEVHDEREMDRVLGIDGVELIGINNRDLGTFKVDISNTKKLLEGERGERIREKGIIVV
GESGLFTPADIAYVQEAGVKAVLVGESLVKQPDPTKGISELFGKDISC

Transcript Sequence

Gene sequence data has not been registered.